PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10028325m
Common NameCICLE_v10028062mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 484aa    MW: 51913 Da    PI: 6.6541
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10028325mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10434481552
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                      kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l
  Ciclev10028325m 434 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLL 481
                      9****************************************9988766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-7430482IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.117432483IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-10434482No hitNo description
PfamPF001702.0E-9434481IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-10434481No hitNo description
CDDcd147031.75E-24435482No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MGGDSDEGNG GNTDMMQRIQ SSFGTSSSSI PKQQTLLSAN QLDLPQLNQN QLRARHFSQF  60
ATNFGGDSSK RVGIPPSHPN QIPPISPYSS IPVSRPGNQQ MGSQNYSPGP THSRSLSQPS  120
LFFSLDSLPP LSPSPFRDSP STSMSDQVST DVSMEDRDGN SHSLLPPSPF NRGNASRIGE  180
SLPPRNKHRR SNSDIPFGFS TVMQSSSPLI SPRFAGGLDK AVSGRENPGV AKPAQLVKKE  240
SSWERGGESN GEGMGERKSE GEVVDDLFSA YMNLENIDAL NSSGTDDKNG NENREDLDSR  300
ASGTKTNGGD SSDNEAESSV NESGNSLQRA GMNSSAEKRE GIKRTAGGDV ASTTRHYRSV  360
SMDSFMGKLN FGDESPKLPP SPGTRPGQLS PSNSIDANSP AFSLEFGNGE FSGAELKKIM  420
ANEKLAEIAL TDPKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQLTL  480
LQL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006423515.10.0hypothetical protein CICLE_v10028062mg
TrEMBLV4SD700.0V4SD70_9R
STRINGPOPTR_0009s12830.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-120bZIP family protein